ClinVar Miner

Submissions for variant NM_000530.8(MPZ):c.214G>T (p.Gly72Trp)

gnomAD frequency: 0.00001  dbSNP: rs749459367
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000638159 SCV000759645 uncertain significance Charcot-Marie-Tooth disease, type I 2022-07-11 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Possibly Damaging"; Align-GVGD: "Class C15"). ClinVar contains an entry for this variant (Variation ID: 531682). This variant has not been reported in the literature in individuals affected with MPZ-related conditions. This variant is present in population databases (rs749459367, gnomAD 0.006%). This sequence change replaces glycine, which is neutral and non-polar, with tryptophan, which is neutral and slightly polar, at codon 72 of the MPZ protein (p.Gly72Trp).
Ambry Genetics RCV002424408 SCV002727175 uncertain significance Inborn genetic diseases 2020-10-12 criteria provided, single submitter clinical testing The p.G72W variant (also known as c.214G>T), located in coding exon 2 of the MPZ gene, results from a G to T substitution at nucleotide position 214. The glycine at codon 72 is replaced by tryptophan, an amino acid with highly dissimilar properties. This amino acid position is well conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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