ClinVar Miner

Submissions for variant NM_000540.3(RYR1):c.2107G>A (p.Gly703Ser)

gnomAD frequency: 0.00002  dbSNP: rs773211015
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000523540 SCV000620973 uncertain significance not provided 2019-01-21 criteria provided, single submitter clinical testing The G703S variant has not been published as a pathogenic variant, nor has it been reported as a benign variant to our knowledge. The G703S variant is not observed at a significant frequency in large population cohorts (Lek et al., 2016; 1000 Genomes Consortium et al., 2015; Exome Variant Server). The G703S variant is a non-conservative amino acid substitution, which is likely to impact secondary protein structure as these residues differ in polarity, charge, size and/or other properties. This substitution occurs at a position that is conserved across species. In silico analysis predicts this variant is probably damaging to the protein structure/function. In summary, based on the currently available information, it is unclear whether this variant is a pathogenic variant or a rare benign variant.
Labcorp Genetics (formerly Invitae), Labcorp RCV000686209 SCV000813717 uncertain significance RYR1-related disorder 2022-09-28 criteria provided, single submitter clinical testing This sequence change replaces glycine, which is neutral and non-polar, with serine, which is neutral and polar, at codon 703 of the RYR1 protein (p.Gly703Ser). This variant is present in population databases (rs773211015, gnomAD 0.008%). This variant has not been reported in the literature in individuals affected with RYR1-related conditions. ClinVar contains an entry for this variant (Variation ID: 452190). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt RYR1 protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Fulgent Genetics, Fulgent Genetics RCV002490921 SCV002779162 uncertain significance Central core myopathy; Malignant hyperthermia, susceptibility to, 1; Congenital multicore myopathy with external ophthalmoplegia; Congenital myopathy with fiber type disproportion; King Denborough syndrome 2022-02-14 criteria provided, single submitter clinical testing
Revvity Omics, Revvity RCV000523540 SCV003810530 uncertain significance not provided 2020-03-15 criteria provided, single submitter clinical testing

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