ClinVar Miner

Submissions for variant NM_000543.5(SMPD1):c.719G>A (p.Arg240Gln)

gnomAD frequency: 0.00668  dbSNP: rs2634197
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001083426 SCV000631415 benign Niemann-Pick disease, type B; Niemann-Pick disease, type A 2024-01-31 criteria provided, single submitter clinical testing
Eurofins Ntd Llc (ga) RCV000596717 SCV000704669 benign not specified 2016-12-15 criteria provided, single submitter clinical testing
Counsyl RCV000666736 SCV000791086 likely benign Niemann-Pick disease, type A 2017-04-25 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000666736 SCV001260985 likely benign Niemann-Pick disease, type A 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as likely benign is not then subjected to further curation. The score for this variant resulted in a classification of likely benign for this disease.
Mayo Clinic Laboratories, Mayo Clinic RCV000675393 SCV000801063 benign not provided 2018-02-08 no assertion criteria provided clinical testing
Natera, Inc. RCV001272135 SCV001453795 benign Sphingomyelin/cholesterol lipidosis 2020-09-16 no assertion criteria provided clinical testing

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