ClinVar Miner

Submissions for variant NM_000545.8(HNF1A):c.717G>A (p.Ala239=)

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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV002370718 SCV002662822 likely benign Maturity onset diabetes mellitus in young 2020-11-22 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Labcorp Genetics (formerly Invitae), Labcorp RCV003730129 SCV004522746 uncertain significance not provided 2023-11-28 criteria provided, single submitter clinical testing This sequence change affects codon 239 of the HNF1A mRNA. It is a 'silent' change, meaning that it does not change the encoded amino acid sequence of the HNF1A protein. The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database. This variant has not been reported in the literature in individuals affected with HNF1A-related conditions. ClinVar contains an entry for this variant (Variation ID: 1757524). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may create or strengthen a splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV004765486 SCV005381749 likely benign not specified 2024-08-27 criteria provided, single submitter clinical testing

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