ClinVar Miner

Submissions for variant NM_000546.5(TP53):c.703A>T (p.Asn235Tyr) (rs786204145)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000168131 SCV000218790 uncertain significance Li-Fraumeni syndrome 2014-11-01 criteria provided, single submitter clinical testing This sequence change replaces asparagine with tyrosine at codon 235 of the TP53 protein (p.Asn235Tyr). The asparagine residue is moderately conserved and there is a large physicochemical difference between asparagine and tyrosine. This sequence change has been reported in the literature and is not present in population databases. Germline sequence changes affecting the same codon have been previously reported in early-onset adrenocortical carcinoma and rhabdomyosarcoma patients (PMID: 7966399, 7706467). Functional studies have shown that missense variants in this codon result in partially deficient p53 activity in vitro (PMID: 21343334). Algorithms developed to predict the effect of missense changes on protein structure and function do not agree on the potential impact of this missense change (SIFT: "deleterious"; PolyPhen-2: "possibly damaging"; Align-GVGD: "Class C15"). In summary, this sequence change affects a codon for which other missense changes have been reported in cancer patients. However, there is no functional or segregation data available for this particular sequence change. For these reasons, this change has been classified as a Variant of Uncertain Significance.

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