Total submissions: 2
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Labcorp Genetics |
RCV001214540 | SCV001386224 | uncertain significance | Li-Fraumeni syndrome | 2021-08-12 | criteria provided, single submitter | clinical testing | This sequence change replaces cysteine with phenylalanine at codon 141 of the TP53 protein (p.Cys141Phe). The cysteine residue is highly conserved and there is a large physicochemical difference between cysteine and phenylalanine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals affected with TP53-related conditions. ClinVar contains an entry for this variant (Variation ID: 376568). Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive. Experimental studies have shown that this missense change does not substantially affect TP53 function (PMID: 12826609). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. |
Institute of Biochemistry, |
RCV000435499 | SCV001450481 | pathogenic | Squamous cell carcinoma of the head and neck | criteria provided, single submitter | case-control |