ClinVar Miner

Submissions for variant NM_000548.5(TSC2):c.3069G>A (p.Thr1023=)

gnomAD frequency: 0.00004  dbSNP: rs373950550
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Total submissions: 8
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000234387 SCV000285330 benign Tuberous sclerosis 2 2025-02-02 criteria provided, single submitter clinical testing
GeneDx RCV001705242 SCV000515036 likely benign not provided 2021-04-21 criteria provided, single submitter clinical testing
Ambry Genetics RCV000571675 SCV000664681 likely benign Hereditary cancer-predisposing syndrome 2016-08-25 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Genome-Nilou Lab RCV000234387 SCV002039283 benign Tuberous sclerosis 2 2021-11-07 criteria provided, single submitter clinical testing
Sema4, Sema4 RCV000571675 SCV002533363 benign Hereditary cancer-predisposing syndrome 2020-10-28 criteria provided, single submitter curation
Fulgent Genetics, Fulgent Genetics RCV002494628 SCV002809675 likely benign Lymphangiomyomatosis; Isolated focal cortical dysplasia type II; Tuberous sclerosis 2 2022-05-12 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV001705242 SCV005216993 likely benign not provided criteria provided, single submitter not provided
KCCC/NGS Laboratory, Kuwait Cancer Control Center RCV000234387 SCV005881415 benign Tuberous sclerosis 2 2025-02-01 criteria provided, single submitter clinical testing

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