ClinVar Miner

Submissions for variant NM_000548.5(TSC2):c.3723C>T (p.Phe1241=)

gnomAD frequency: 0.00082  dbSNP: rs45486193
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Total submissions: 14
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV000163886 SCV000214476 likely benign Hereditary cancer-predisposing syndrome 2014-09-24 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Labcorp Genetics (formerly Invitae), Labcorp RCV001082224 SCV000285361 benign Tuberous sclerosis 2 2025-01-23 criteria provided, single submitter clinical testing
GeneDx RCV000713929 SCV000515039 benign not provided 2019-08-09 criteria provided, single submitter clinical testing This variant is associated with the following publications: (PMID: 17304050)
Eurofins Ntd Llc (ga) RCV000713929 SCV000701912 uncertain significance not provided 2016-10-06 criteria provided, single submitter clinical testing
Athena Diagnostics RCV000713929 SCV000844576 benign not provided 2017-11-22 criteria provided, single submitter clinical testing
Genome-Nilou Lab RCV001082224 SCV002039779 benign Tuberous sclerosis 2 2021-11-07 criteria provided, single submitter clinical testing
Sema4, Sema4 RCV000163886 SCV002533440 benign Hereditary cancer-predisposing syndrome 2020-12-03 criteria provided, single submitter curation
CeGaT Center for Human Genetics Tuebingen RCV000713929 SCV004033432 likely benign not provided 2023-08-01 criteria provided, single submitter clinical testing TSC2: BP4, BP7, BS1
Color Diagnostics, LLC DBA Color Health RCV001082224 SCV004360903 benign Tuberous sclerosis 2 2022-10-03 criteria provided, single submitter clinical testing
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000713929 SCV004564607 benign not provided 2023-11-17 criteria provided, single submitter clinical testing
All of Us Research Program, National Institutes of Health RCV000042530 SCV004823326 benign Tuberous sclerosis syndrome 2024-02-05 criteria provided, single submitter clinical testing
Tuberous sclerosis database (TSC2) RCV000042530 SCV000066321 not provided Tuberous sclerosis syndrome no assertion provided curation
Genome Diagnostics Laboratory, Amsterdam University Medical Center RCV000713929 SCV001809145 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000713929 SCV001971862 likely benign not provided no assertion criteria provided clinical testing

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