ClinVar Miner

Submissions for variant NM_000548.5(TSC2):c.3786dup (p.Pro1263fs)

dbSNP: rs2090170656
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001040318 SCV001203882 pathogenic Tuberous sclerosis 2 2019-01-19 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. Loss-of-function variants in TSC2 are known to be pathogenic (PMID: 10205261, 17304050). This variant has not been reported in the literature in individuals with TSC2-related conditions. This variant is not present in population databases (ExAC no frequency). This sequence change creates a premature translational stop signal (p.Pro1263Thrfs*59) in the TSC2 gene. It is expected to result in an absent or disrupted protein product.
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV003736963 SCV004564281 likely pathogenic not provided 2023-01-06 criteria provided, single submitter clinical testing The TSC2 c.3786dup; p.Pro1263ThrfsTer59 variant (rs2090170656), to our knowledge, is not reported in the medical literature but is reported in ClinVar (Variation ID: 838722). This variant is absent from the Genome Aggregation Database, indicating it is not a common polymorphism. This variant causes a frameshift by inserting a single nucleotide, so it is predicted to result in a truncated protein or mRNA subject to nonsense-mediated decay. Based on available information, this variant is considered to be likely pathogenic.

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