ClinVar Miner

Submissions for variant NM_000548.5(TSC2):c.794G>T (p.Gly265Val)

dbSNP: rs1188591008
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002034388 SCV002310868 uncertain significance Tuberous sclerosis 2 2024-10-27 criteria provided, single submitter clinical testing This sequence change replaces glycine, which is neutral and non-polar, with valine, which is neutral and non-polar, at codon 265 of the TSC2 protein (p.Gly265Val). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with TSC2-related conditions. ClinVar contains an entry for this variant (Variation ID: 1522362). Invitae Evidence Modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) has been performed for this missense variant. However, the output from this modeling did not meet the statistical confidence thresholds required to predict the impact of this variant on TSC2 protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Sema4, Sema4 RCV002255717 SCV002534112 uncertain significance Hereditary cancer-predisposing syndrome 2021-11-30 criteria provided, single submitter curation
Ambry Genetics RCV002255717 SCV002677987 uncertain significance Hereditary cancer-predisposing syndrome 2021-09-30 criteria provided, single submitter clinical testing The p.G265V variant (also known as c.794G>T), located in coding exon 8 of the TSC2 gene, results from a G to T substitution at nucleotide position 794. The glycine at codon 265 is replaced by valine, an amino acid with dissimilar properties. This amino acid position is highly conserved in available vertebrate species. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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