ClinVar Miner

Submissions for variant NM_000551.4(VHL):c.305C>T (p.Pro102Leu)

gnomAD frequency: 0.00001  dbSNP: rs1379270197
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000799472 SCV000939136 uncertain significance Chuvash polycythemia; Von Hippel-Lindau syndrome 2023-08-10 criteria provided, single submitter clinical testing Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Not Available"; PolyPhen-2: "Benign"; Align-GVGD: "Not Available". The leucine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. ClinVar contains an entry for this variant (Variation ID: 645405). This variant has not been reported in the literature in individuals affected with VHL-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces proline, which is neutral and non-polar, with leucine, which is neutral and non-polar, at codon 102 of the VHL protein (p.Pro102Leu).
GeneDx RCV003322824 SCV004028278 uncertain significance not provided 2023-02-16 criteria provided, single submitter clinical testing Not observed at significant frequency in large population cohorts (gnomAD); In silico analysis supports that this missense variant does not alter protein structure/function; Has not been previously published as pathogenic or benign to our knowledge; This variant is associated with the following publications: (PMID: Verma2016[article])
All of Us Research Program, National Institutes of Health RCV004001627 SCV004822000 uncertain significance Von Hippel-Lindau syndrome 2024-01-11 criteria provided, single submitter clinical testing

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