ClinVar Miner

Submissions for variant NM_000553.6(WRN):c.1145A>G (p.Lys382Arg)

gnomAD frequency: 0.00001  dbSNP: rs541455377
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000696122 SCV000824670 uncertain significance Werner syndrome 2022-09-01 criteria provided, single submitter clinical testing This sequence change replaces lysine, which is basic and polar, with arginine, which is basic and polar, at codon 382 of the WRN protein (p.Lys382Arg). This variant is present in population databases (rs541455377, gnomAD 0.02%). This variant has not been reported in the literature in individuals affected with WRN-related conditions. ClinVar contains an entry for this variant (Variation ID: 574239). Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Not Available"; PolyPhen-2: "Benign"; Align-GVGD: "Not Available". The arginine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002532345 SCV003734895 uncertain significance Inborn genetic diseases 2022-11-18 criteria provided, single submitter clinical testing The c.1145A>G (p.K382R) alteration is located in exon 9 (coding exon 8) of the WRN gene. This alteration results from a A to G substitution at nucleotide position 1145, causing the lysine (K) at amino acid position 382 to be replaced by an arginine (R). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.
Laboratory of Molecular Epidemiology of Birth Defects, West China Second University Hospital, Sichuan University RCV003153809 SCV003843301 benign Ovarian cancer 2022-01-01 criteria provided, single submitter clinical testing

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