ClinVar Miner

Submissions for variant NM_000572.3(IL10):c.58C>T (p.Pro20Ser)

gnomAD frequency: 0.00038  dbSNP: rs141219090
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000631402 SCV000752473 uncertain significance Inflammatory bowel disease 2022-08-31 criteria provided, single submitter clinical testing This sequence change replaces proline, which is neutral and non-polar, with serine, which is neutral and polar, at codon 20 of the IL10 protein (p.Pro20Ser). This variant is present in population databases (rs141219090, gnomAD 0.1%). This variant has not been reported in the literature in individuals affected with IL10-related conditions. ClinVar contains an entry for this variant (Variation ID: 526788). Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The serine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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