ClinVar Miner

Submissions for variant NM_000642.3(AGL):c.4259+3A>T

dbSNP: rs1655048891
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001071007 SCV001236288 uncertain significance Glycogen storage disease type III 2022-06-22 criteria provided, single submitter clinical testing This sequence change falls in intron 31 of the AGL gene. It does not directly change the encoded amino acid sequence of the AGL protein. It affects a nucleotide within the consensus splice site. This variant is not present in population databases (gnomAD no frequency). This variant has been observed in individual(s) with clinical features of glycogen storage disease type III (Invitae). ClinVar contains an entry for this variant (Variation ID: 863931). Variants that disrupt the consensus splice site are a relatively common cause of aberrant splicing (PMID: 17576681, 9536098). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Natera, Inc. RCV001071007 SCV001459029 uncertain significance Glycogen storage disease type III 2020-01-17 no assertion criteria provided clinical testing

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