ClinVar Miner

Submissions for variant NM_000814.6(GABRB3):c.1286G>A (p.Arg429Gln)

gnomAD frequency: 0.00001  dbSNP: rs777882335
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV002226114 SCV002504447 likely benign not provided 2019-12-23 criteria provided, single submitter clinical testing See Variant Classification Assertion Criteria.
Labcorp Genetics (formerly Invitae), Labcorp RCV003089208 SCV003255017 uncertain significance Epilepsy, childhood absence, susceptibility to, 1; Epilepsy, childhood absence, susceptibility to, 5 2023-11-27 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with glutamine, which is neutral and polar, at codon 429 of the GABRB3 protein (p.Arg429Gln). This variant is present in population databases (rs777882335, gnomAD 0.003%). This missense change has been observed in individual(s) with generalized epilepsy with febrile seizures plus (PMID: 28053010). ClinVar contains an entry for this variant (Variation ID: 1678800). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt GABRB3 protein function with a negative predictive value of 95%. Experimental studies are conflicting or provide insufficient evidence to determine the effect of this variant on GABRB3 function (PMID: 28053010). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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