ClinVar Miner

Submissions for variant NM_000975.5(RPL11):c.508-1G>A

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV002335895 SCV002640507 likely pathogenic Diamond-Blackfan anemia 2014-10-20 criteria provided, single submitter clinical testing The c.508-1G>A intronic variant, results from a G to A one nucleotide upstream from coding exon 6 of the RPL11 gene. This variant was not reported in population based cohorts in the following databases: Database of Single Nucleotide Polymorphisms (dbSNP), NHLBI Exome Sequencing Project (ESP), and 1000 Genomes Project. In the ESP, this variant was not observed in 6503 samples (13006 alleles) with coverage at this position. This nucleotide position is highly conserved in available vertebrate species. Using the BDGP and ESEfinder splice site prediction tools, this alteration is predicted to abolish the native acceptor splice site; however, direct evidence is unavailable. Alterations that disrupt the canonical splice acceptor site are typically deleterious in nature (ACMG Recommendations for Standards for Interpretation and Reporting of Sequence Variations. Revision 2007. Genet Med. 2008;10:294). As such, the c.508-1G>A variant is classified as likely pathogenic.

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