ClinVar Miner

Submissions for variant NM_001005242.3(PKP2):c.1509T>C (p.Asn503=)

gnomAD frequency: 0.00013  dbSNP: rs143782040
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000155805 SCV000171017 benign not specified 2014-04-27 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000155805 SCV000205516 benign not specified 2014-10-02 criteria provided, single submitter clinical testing p.Asn547Asn in exon 7 of PKP2: This variant is not expected to have clinical sig nificance because it has been identified in 1.0% (6/572) of East Asian chromosom es by the 1000 Genomes Project (dbSNP rs143782040).
Labcorp Genetics (formerly Invitae), Labcorp RCV000226692 SCV000288596 benign Arrhythmogenic right ventricular dysplasia 9 2024-01-26 criteria provided, single submitter clinical testing
Ambry Genetics RCV000618913 SCV000735904 likely benign Cardiovascular phenotype 2016-04-25 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Color Diagnostics, LLC DBA Color Health RCV000771252 SCV000903354 benign Cardiomyopathy 2018-07-09 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000226692 SCV001269792 likely benign Arrhythmogenic right ventricular dysplasia 9 2018-02-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). Publications were found based on this search. The evidence from the literature, in combination with allele frequency data from public databases where available, was sufficient to determine this variant is unlikely to cause disease. Therefore, this variant is classified as likely benign.
All of Us Research Program, National Institutes of Health RCV003997448 SCV004846004 benign Arrhythmogenic right ventricular cardiomyopathy 2024-02-05 criteria provided, single submitter clinical testing

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