ClinVar Miner

Submissions for variant NM_001005242.3(PKP2):c.1820_1823dup (p.Ser608fs)

dbSNP: rs397517013
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV000622111 SCV000737649 pathogenic Cardiovascular phenotype 2019-05-08 criteria provided, single submitter clinical testing The c.1952_1955dupGAAG pathogenic mutation, located in coding exon 9 of the PKP2 gene, results from a duplication of GAAG at nucleotide positions 1952 to 1955, causing a translational frameshift with a predicted alternate stop codon (p.S652Rfs*92). This alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay. As such, this alteration is interpreted as a disease-causing mutation.
Labcorp Genetics (formerly Invitae), Labcorp RCV000640004 SCV000761591 pathogenic Arrhythmogenic right ventricular dysplasia 9 2022-02-03 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. ClinVar contains an entry for this variant (Variation ID: 45051). This variant has not been reported in the literature in individuals affected with PKP2-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change creates a premature translational stop signal (p.Ser652Argfs*92) in the PKP2 gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in PKP2 are known to be pathogenic (PMID: 15489853, 23911551).
GeneDx RCV001548469 SCV001768385 pathogenic not provided 2020-11-09 criteria provided, single submitter clinical testing Has not been previously published as pathogenic or benign to our knowledge; Not observed in large population cohorts (Lek et al., 2016); Frameshift variant predicted to result in protein truncation or nonsense mediated decay in a gene for which loss-of-function is a known mechanism of disease; Reported in ClinVar as pathogenic/likely pathogenic (ClinVar Variant ID# 45051; Landrum et al., 2016); This variant is associated with the following publications: (PMID: 32372669)
Greenwood Genetic Center Diagnostic Laboratories, Greenwood Genetic Center RCV000640004 SCV005043872 likely pathogenic Arrhythmogenic right ventricular dysplasia 9 2024-01-08 criteria provided, single submitter clinical testing PVS1, PM2
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000038191 SCV000061858 likely pathogenic Arrhythmogenic right ventricular cardiomyopathy 2008-12-09 no assertion criteria provided clinical testing

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