ClinVar Miner

Submissions for variant NM_001005242.3(PKP2):c.306C>A (p.Ser102=)

gnomAD frequency: 0.00012  dbSNP: rs376613662
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Total submissions: 10
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000216533 SCV000270736 likely benign not specified 2015-05-05 criteria provided, single submitter clinical testing p.Ser102Ser in exon 2 of PKP2: This variant is not expected to have clinical sig nificance because it does not alter an amino acid residue and is not located wit hin the splice consensus sequence. It has been identified in 0.1% (22/16510) of South Asian chromosomes including 2 homozygotes and 37/66714 European chromosome s by the Exome Aggregation Consortium (ExAC, http://exac.broadinstitute.org/; db SNP rs376613662).
Illumina Laboratory Services, Illumina RCV000640040 SCV000378473 uncertain significance Arrhythmogenic right ventricular dysplasia 9 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
GeneDx RCV001705197 SCV000515353 likely benign not provided 2020-09-28 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000640040 SCV000761628 benign Arrhythmogenic right ventricular dysplasia 9 2024-01-28 criteria provided, single submitter clinical testing
Color Diagnostics, LLC DBA Color Health RCV000777733 SCV000913691 likely benign Cardiomyopathy 2018-09-28 criteria provided, single submitter clinical testing
Ambry Genetics RCV002444855 SCV002753850 likely benign Cardiovascular phenotype 2024-03-28 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
CHEO Genetics Diagnostic Laboratory, Children's Hospital of Eastern Ontario RCV000777733 SCV003838850 likely benign Cardiomyopathy 2023-06-14 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000216533 SCV004803395 likely benign not specified 2024-01-15 criteria provided, single submitter clinical testing
All of Us Research Program, National Institutes of Health RCV003997709 SCV004846548 likely benign Arrhythmogenic right ventricular cardiomyopathy 2024-02-05 criteria provided, single submitter clinical testing
Cohesion Phenomics RCV000777733 SCV003803064 likely benign Cardiomyopathy 2022-10-04 no assertion criteria provided clinical testing

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