ClinVar Miner

Submissions for variant NM_001009944.3(PKD1):c.6868G>T (p.Asp2290Tyr)

dbSNP: rs550509675
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV001762943 SCV001988945 uncertain significance not provided 2021-01-20 criteria provided, single submitter clinical testing Identified in multiple individuals with clinical features of ADPKD (Jin et al., 2016; Liang et al., 2019; Kim et al. 2020). Segregation information was available in one individual who inherited this variant from a mother who was reported to be clinically unaffected. This individual also possessed a nonsense variant and another missense variant in PKD1 (Liang et al., 2019); In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; This variant is associated with the following publications: (PMID: 27782177, 31730820, 32816041)
Ambry Genetics RCV004040070 SCV005005273 likely benign Inborn genetic diseases 2023-10-29 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

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