ClinVar Miner

Submissions for variant NM_001011551.3(C1GALT1C1):c.553G>A (p.Gly185Arg)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Victorian Clinical Genetics Services, Murdoch Childrens Research Institute RCV004788584 SCV005398970 uncertain significance Hemolytic uremic syndrome, atypical, 8, with rhizomelic short stature 2024-10-10 criteria provided, single submitter clinical testing Based on the classification scheme VCGS_Germline_v1.3.4, this variant is classified as VUS-3A. Following criteria are met: 0102 - Loss of function is a likely mechanism of disease in this gene and is associated with haemolytic uremic syndrome, atypical, 8, with rhizomelic short stature (MIM#301110). This assertion is currently based on functional studies for only one missense variant (PMID: 37216524). (I) 0110 - This gene is associated with X-linked disease. Heterozygous females with skewed X-inactivation have been reported with an attenuated form of atypical haemolytic anaemia (PMID: 37216524). (I) 0200 - Variant is predicted to result in a missense amino acid change from glycine to arginine. (I) 0253 - This variant is hemizygous. (I) 0301 - Variant is absent from gnomAD (both v2 and v3). (SP) 0501 - Missense variant consistently predicted to be damaging by multiple in silico tools or highly conserved with a major amino acid change. (SP) 0604 - Variant is not located in an established domain, motif, hotspot or informative constraint region. (I) 0705 - No comparable missense variants have previous evidence for pathogenicity. (I) 0807 - This variant has no previous evidence of pathogenicity. (I) 0905 - No published segregation evidence has been identified for this variant. (I) 1007 - No published functional evidence has been identified for this variant. (I) 1208 - Inheritance information for this variant is not currently available in this individual. (I) Legend: (SP) - Supporting pathogenic, (I) - Information, (SB) - Supporting benign

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