ClinVar Miner

Submissions for variant NM_001018005.2(TPM1):c.180C>T (p.Tyr60=)

gnomAD frequency: 0.00273  dbSNP: rs17850194
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Total submissions: 12
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000036317 SCV000059969 benign not specified 2015-09-28 criteria provided, single submitter clinical testing p.Tyr60Tyr in exon 2 of TPM1: This variant is not expected to have clinical sign ificance because it does not alter an amino acid residue and is not located with in the splice consensus sequence. It has been identified in 0.9% (98/10336) of A frican chromosomes by the Exome Aggregation Consortium (ExAC, http://exac.broadi nstitute.org; dbSNP rs17850194).
GeneDx RCV000036317 SCV000169035 benign not specified 2013-04-11 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Invitae RCV000226718 SCV000285665 benign Hypertrophic cardiomyopathy 2024-01-29 criteria provided, single submitter clinical testing
Ambry Genetics RCV000252086 SCV000320345 likely benign Cardiovascular phenotype 2016-12-02 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000036317 SCV001159424 likely benign not specified 2019-06-02 criteria provided, single submitter clinical testing
Color Diagnostics, LLC DBA Color Health RCV001190413 SCV001357893 benign Cardiomyopathy 2018-11-25 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000036317 SCV004038011 benign not specified 2023-08-19 criteria provided, single submitter clinical testing
All of Us Research Program, National Institutes of Health RCV000226718 SCV004815438 benign Hypertrophic cardiomyopathy 2024-02-05 criteria provided, single submitter clinical testing
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen RCV001530147 SCV001744870 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics, Academic Medical Center RCV000036317 SCV001924052 benign not specified no assertion criteria provided clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ RCV000036317 SCV001959584 benign not specified no assertion criteria provided clinical testing
Cohesion Phenomics RCV000226718 SCV003803071 benign Hypertrophic cardiomyopathy 2022-09-27 no assertion criteria provided clinical testing

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