Total submissions: 10
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Illumina Laboratory Services, |
RCV000331306 | SCV000481919 | benign | Fanconi anemia complementation group B | 2018-01-13 | criteria provided, single submitter | clinical testing | This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease. |
Illumina Laboratory Services, |
RCV000388194 | SCV000481920 | benign | VACTERL association, X-linked, with or without hydrocephalus | 2018-01-13 | criteria provided, single submitter | clinical testing | This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease. |
Genetic Services Laboratory, |
RCV000500090 | SCV000594666 | benign | not specified | 2018-04-26 | criteria provided, single submitter | clinical testing | |
Invitae | RCV000524700 | SCV000626270 | benign | Fanconi anemia | 2024-01-30 | criteria provided, single submitter | clinical testing | |
Sema4, |
RCV000524700 | SCV002534227 | benign | Fanconi anemia | 2020-02-26 | criteria provided, single submitter | curation | |
Ambry Genetics | RCV002392931 | SCV002698771 | uncertain significance | Inborn genetic diseases | 2014-07-07 | criteria provided, single submitter | clinical testing | The p.K498N variant (also known as c.1494G>T), located in coding exon 5 of the FANCB gene, results from a G to T substitution at nucleotide position 1494. The lysine at codon 498 is replaced by asparagine, an amino acid with similar properties. This variant was previously reported in the SNPDatabase as rs199510538, but a population frequency was unavailable. This variant was not reported in population based cohorts in the following databases: NHLBI Exome Sequencing Project (ESP), and 1000 Genomes Project. In the ESP, this variant was not observed in 6,500 samples with coverage at this position. This amino acid position is not conserved in available vertebrate species. In addition, this alteration is predicted to be possibly damaging and tolerated by PolyPhen and SIFT in silico analyses, respectively. Since supporting evidence for this variant is limited at this time, the clinical significance of this variant remains unclear. |
Fulgent Genetics, |
RCV002488832 | SCV002799993 | likely benign | Fanconi anemia complementation group B; VACTERL association, X-linked, with or without hydrocephalus | 2021-09-23 | criteria provided, single submitter | clinical testing | |
KCCC/NGS Laboratory, |
RCV000331306 | SCV004017596 | benign | Fanconi anemia complementation group B | 2023-07-07 | criteria provided, single submitter | clinical testing | |
Genome Diagnostics Laboratory, |
RCV000500090 | SCV001808069 | benign | not specified | no assertion criteria provided | clinical testing | ||
Clinical Genetics DNA and cytogenetics Diagnostics Lab, |
RCV000500090 | SCV001968244 | benign | not specified | no assertion criteria provided | clinical testing |