ClinVar Miner

Submissions for variant NM_001018113.3(FANCB):c.1996G>A (p.Gly666Ser)

gnomAD frequency: 0.00343  dbSNP: rs145110602
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000236495 SCV000294249 benign Fanconi anemia 2024-01-31 criteria provided, single submitter clinical testing
Genetic Services Laboratory, University of Chicago RCV000503767 SCV000594665 benign not specified 2018-11-19 criteria provided, single submitter clinical testing
Ambry Genetics RCV000721015 SCV000851899 uncertain significance History of neurodevelopmental disorder 2013-03-16 criteria provided, single submitter clinical testing Co-segregation data for this variant is currently unavailable.This variant has not been detected in conjunction with a pathogenic mutation to date.This variant was previously reported in the SNPDatabase as rs145110602. Based on data from the NHLBI Exome Sequencing Project (ESP), the A-allele has an overall frequency of approximately 0.25% (5/1997) total male alleles studied and but was not observed in the homozygous state out of 3381females studied. The A-allele was observed in 0.96% (5/522) African American male alleles but was absent out of 1475 European American male alleles studied. Based on data from the 1000 Genomes Project, the A-allele has an overall frequency of approximately 2/1048 (0.19%) and the highest frequency was in 2/48 (4.17%) African-American SW male chromosomes studied.This amino acid position is not conserved on species alignment.This alteration is predicted to be benign with a score of 0.002 (sensitivity: 0.99; specificity: 0.17)This alteration is predicted to be tolerated with a score of 0.390 (conservation: 2.57)
KCCC/NGS Laboratory, Kuwait Cancer Control Center RCV003316313 SCV004017598 benign Fanconi anemia complementation group B 2023-07-07 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003930015 SCV004745426 benign FANCB-related condition 2019-09-18 criteria provided, single submitter clinical testing This variant is classified as benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Laboratory of Diagnostic Genome Analysis, Leiden University Medical Center (LUMC) RCV000503767 SCV001800787 benign not specified no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV001727653 SCV001971103 likely benign not provided no assertion criteria provided clinical testing

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