ClinVar Miner

Submissions for variant NM_001018115.3(FANCD2):c.28T>C (p.Ser10Pro)

gnomAD frequency: 0.00009  dbSNP: rs150075366
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000697784 SCV000826414 uncertain significance Fanconi anemia 2024-01-24 criteria provided, single submitter clinical testing This sequence change replaces serine, which is neutral and polar, with proline, which is neutral and non-polar, at codon 10 of the FANCD2 protein (p.Ser10Pro). This variant is present in population databases (rs150075366, gnomAD 0.03%). This variant has not been reported in the literature in individuals affected with FANCD2-related conditions. ClinVar contains an entry for this variant (Variation ID: 575540). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be disruptive. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Fulgent Genetics, Fulgent Genetics RCV000764451 SCV000895513 uncertain significance Fanconi anemia complementation group D2 2018-10-31 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000764451 SCV001311829 uncertain significance Fanconi anemia complementation group D2 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases did not allow this variant to be ruled in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.
Institute for Clinical Genetics, University Hospital TU Dresden, University Hospital TU Dresden RCV003238186 SCV002011311 uncertain significance not provided 2021-11-03 criteria provided, single submitter clinical testing
Sema4, Sema4 RCV000697784 SCV002529506 uncertain significance Fanconi anemia 2021-09-16 criteria provided, single submitter curation

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