ClinVar Miner

Submissions for variant NM_001032283.3(TMPO):c.565+1048G>C

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002731526 SCV003012694 uncertain significance Loeys-Dietz syndrome 2 2022-10-25 criteria provided, single submitter clinical testing This sequence change replaces glycine, which is neutral and non-polar, with alanine, which is neutral and non-polar, at codon 210 of the TMPO protein (p.Gly210Ala). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with TMPO-related conditions. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt TMPO protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV004877750 SCV005526566 uncertain significance not specified 2024-10-28 criteria provided, single submitter clinical testing The p.G210A variant (also known as c.629G>C), located in coding exon 4 of the TMPO gene, results from a G to C substitution at nucleotide position 629. The glycine at codon 210 is replaced by alanine, an amino acid with similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Based on the available evidence, the clinical significance of this variant remains unclear.

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