ClinVar Miner

Submissions for variant NM_001033855.3(DCLRE1C):c.752C>G (p.Thr251Ser)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV002817832 SCV003602590 uncertain significance Inborn genetic diseases 2022-02-02 criteria provided, single submitter clinical testing The c.752C>G (p.T251S) alteration is located in exon 9 (coding exon 9) of the DCLRE1C gene. This alteration results from a C to G substitution at nucleotide position 752, causing the threonine (T) at amino acid position 251 to be replaced by a serine (S). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.
Labcorp Genetics (formerly Invitae), Labcorp RCV003611625 SCV004531405 uncertain significance Severe combined immunodeficiency due to DCLRE1C deficiency 2023-11-02 criteria provided, single submitter clinical testing This sequence change replaces threonine, which is neutral and polar, with serine, which is neutral and polar, at codon 251 of the DCLRE1C protein (p.Thr251Ser). This variant is present in population databases (no rsID available, gnomAD 0.003%). This variant has not been reported in the literature in individuals affected with DCLRE1C-related conditions. ClinVar contains an entry for this variant (Variation ID: 2275234). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt DCLRE1C protein function with a negative predictive value of 80%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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