ClinVar Miner

Submissions for variant NM_001036.6(RYR3):c.12437G>T (p.Cys4146Phe)

gnomAD frequency: 0.00015  dbSNP: rs191637587
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001226980 SCV001399313 uncertain significance Epileptic encephalopathy 2022-07-06 criteria provided, single submitter clinical testing Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Possibly Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. ClinVar contains an entry for this variant (Variation ID: 954517). This variant has not been reported in the literature in individuals affected with RYR3-related conditions. This variant is present in population databases (rs191637587, gnomAD 0.01%). This sequence change replaces cysteine, which is neutral and slightly polar, with phenylalanine, which is neutral and non-polar, at codon 4146 of the RYR3 protein (p.Cys4146Phe).
Ambry Genetics RCV002562618 SCV003747994 uncertain significance Inborn genetic diseases 2021-06-22 criteria provided, single submitter clinical testing The c.12437G>T (p.C4146F) alteration is located in exon 89 (coding exon 89) of the RYR3 gene. This alteration results from a G to T substitution at nucleotide position 12437, causing the cysteine (C) at amino acid position 4146 to be replaced by a phenylalanine (F). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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