ClinVar Miner

Submissions for variant NM_001040108.2(MLH3):c.1783G>A (p.Val595Ile)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV004061463 SCV002711275 uncertain significance not specified 2023-09-16 criteria provided, single submitter clinical testing The p.V595I variant (also known as c.1783G>A), located in coding exon 1 of the MLH3 gene, results from a G to A substitution at nucleotide position 1783. The valine at codon 595 is replaced by isoleucine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Labcorp Genetics (formerly Invitae), Labcorp RCV005097760 SCV005731529 uncertain significance Colorectal cancer, hereditary nonpolyposis, type 7 2024-07-03 criteria provided, single submitter clinical testing This sequence change replaces valine, which is neutral and non-polar, with isoleucine, which is neutral and non-polar, at codon 595 of the MLH3 protein (p.Val595Ile). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with MLH3-related conditions. ClinVar contains an entry for this variant (Variation ID: 1780047). Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Not Available"; PolyPhen-2: "Benign"; Align-GVGD: "Not Available". The isoleucine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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