ClinVar Miner

Submissions for variant NM_001040142.2(SCN2A):c.5446G>T (p.Ala1816Ser)

gnomAD frequency: 0.00079  dbSNP: rs147084515
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000868109 SCV000242734 benign not provided 2019-04-16 criteria provided, single submitter clinical testing
Genetic Services Laboratory, University of Chicago RCV000189103 SCV000248818 uncertain significance not specified 2015-04-22 criteria provided, single submitter clinical testing
Ambry Genetics RCV002317154 SCV000850802 likely benign Inborn genetic diseases 2018-06-21 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Invitae RCV001083577 SCV001009406 likely benign Seizures, benign familial infantile, 3; Developmental and epileptic encephalopathy, 11 2024-01-30 criteria provided, single submitter clinical testing
Athena Diagnostics Inc RCV000868109 SCV001145463 likely benign not provided 2018-11-29 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003985292 SCV004750725 likely benign SCN2A-related disorder 2020-09-04 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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