ClinVar Miner

Submissions for variant NM_001042492.3(NF1):c.1901T>C (p.Ile634Thr)

gnomAD frequency: 0.00002  dbSNP: rs527563505
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Total submissions: 8
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV000217933 SCV000275351 likely benign Hereditary cancer-predisposing syndrome 2016-03-01 criteria provided, single submitter clinical testing In silico models in agreement (benign);Rarity in general population databases (dbsnp, esp, 1000 genomes);Subpopulation frequency in support of benign classification
Labcorp Genetics (formerly Invitae), Labcorp RCV000459283 SCV000554951 likely benign Neurofibromatosis, type 1 2025-01-20 criteria provided, single submitter clinical testing
GeneDx RCV001564100 SCV001787205 likely benign not provided 2020-02-26 criteria provided, single submitter clinical testing
Sema4, Sema4 RCV000217933 SCV002527428 benign Hereditary cancer-predisposing syndrome 2022-02-02 criteria provided, single submitter curation
Genome-Nilou Lab RCV000459283 SCV002561068 benign Neurofibromatosis, type 1 2022-03-15 criteria provided, single submitter clinical testing
Ambry Genetics RCV004558515 SCV005047849 likely benign Hereditary cancer-predisposing syndrome; Cardiovascular phenotype 2019-02-07 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
KCCC/NGS Laboratory, Kuwait Cancer Control Center RCV000459283 SCV005880940 benign Neurofibromatosis, type 1 2025-02-01 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV004547541 SCV004764795 likely benign NF1-related disorder 2022-08-11 no assertion criteria provided clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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