ClinVar Miner

Submissions for variant NM_001042492.3(NF1):c.2660C>T (p.Ala887Val)

dbSNP: rs1567849029
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000688090 SCV000815687 uncertain significance Neurofibromatosis, type 1 2023-07-07 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Not Available"; PolyPhen-2: "Benign"; Align-GVGD: "Not Available". The valine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. ClinVar contains an entry for this variant (Variation ID: 567890). This variant has not been reported in the literature in individuals affected with NF1-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces alanine, which is neutral and non-polar, with valine, which is neutral and non-polar, at codon 887 of the NF1 protein (p.Ala887Val).
Ambry Genetics RCV004559357 SCV005047596 uncertain significance Hereditary cancer-predisposing syndrome; Cardiovascular phenotype 2023-10-27 criteria provided, single submitter clinical testing The p.A887V variant (also known as c.2660C>T), located in coding exon 21 of the NF1 gene, results from a C to T substitution at nucleotide position 2660. The alanine at codon 887 is replaced by valine, an amino acid with similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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