ClinVar Miner

Submissions for variant NM_001042492.3(NF1):c.3479G>A (p.Gly1160Asp)

dbSNP: rs2067138342
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001068391 SCV001233503 likely pathogenic Neurofibromatosis, type 1 2023-05-08 criteria provided, single submitter clinical testing In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt NF1 protein function. ClinVar contains an entry for this variant (Variation ID: 861799). This missense change has been observed in individual(s) with neurofibromatosis type 1 (Invitae). This variant is not present in population databases (gnomAD no frequency). This sequence change replaces glycine, which is neutral and non-polar, with aspartic acid, which is acidic and polar, at codon 1160 of the NF1 protein (p.Gly1160Asp).
Medical Genetics, University of Parma RCV001068391 SCV002567784 likely pathogenic Neurofibromatosis, type 1 2022-08-17 criteria provided, single submitter clinical testing
Ambry Genetics RCV004559896 SCV005047714 uncertain significance Hereditary cancer-predisposing syndrome; Cardiovascular phenotype 2021-12-21 criteria provided, single submitter clinical testing The c.3479G>A (p.G1160D) alteration is located in exon 26 (coding exon 26) of the NF1 gene. This alteration results from a G to A substitution at nucleotide position 3479, causing the glycine (G) at amino acid position 1160 to be replaced by an aspartic acid (D). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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