ClinVar Miner

Submissions for variant NM_001042492.3(NF1):c.4824T>G (p.Tyr1608Ter)

dbSNP: rs1567865089
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001951403 SCV002246613 pathogenic Neurofibromatosis, type 1 2023-10-23 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Tyr1587*) in the NF1 gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in NF1 are known to be pathogenic (PMID: 10712197, 23913538). This variant is not present in population databases (gnomAD no frequency). This premature translational stop signal has been observed in individual(s) with neurofibromatosis type 1 (PMID: 34418705). ClinVar contains an entry for this variant (Variation ID: 1460057). For these reasons, this variant has been classified as Pathogenic.
Ambry Genetics RCV002334978 SCV002634685 pathogenic Hereditary cancer-predisposing syndrome; Cardiovascular phenotype 2022-01-28 criteria provided, single submitter clinical testing The p.Y1587* pathogenic mutation (also known as c.4761T>G), located in coding exon 35 of the NF1 gene, results from a T to G substitution at nucleotide position 4761. This changes the amino acid from a tyrosine to a stop codon within coding exon 35. This alteration has been observed in at least one individual with a personal and/or family history that is consistent with NF1-related disease (Ambry internal data). This variant is considered to be rare based on population cohorts in the Genome Aggregation Database (gnomAD). Additionally, this alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay. As such, this alteration is interpreted as a disease-causing mutation.

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