ClinVar Miner

Submissions for variant NM_001042492.3(NF1):c.520G>T (p.Val174Phe)

dbSNP: rs1555607084
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV002316620 SCV000666741 uncertain significance Hereditary cancer-predisposing syndrome; Cardiovascular phenotype 2018-11-08 criteria provided, single submitter clinical testing The p.V174F variant (also known as c.520G>T), located in coding exon 5 of the NF1 gene, results from a G to T substitution at nucleotide position 520. The valine at codon 174 is replaced by phenylalanine, an amino acid with highly similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, this alteration is predicted to be deleterious by in silico analysis.Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Invitae RCV000820168 SCV000960868 uncertain significance Neurofibromatosis, type 1 2022-11-20 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) has been performed at Invitae for this missense variant, however the output from this modeling did not meet the statistical confidence thresholds required to predict the impact of this variant on NF1 protein function. ClinVar contains an entry for this variant (Variation ID: 481930). This variant has not been reported in the literature in individuals affected with NF1-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces valine, which is neutral and non-polar, with phenylalanine, which is neutral and non-polar, at codon 174 of the NF1 protein (p.Val174Phe).
Genome-Nilou Lab RCV000820168 SCV002561478 uncertain significance Neurofibromatosis, type 1 2022-03-15 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV002483529 SCV002775981 uncertain significance Neurofibromatosis, familial spinal; Juvenile myelomonocytic leukemia; Neurofibromatosis, type 1; Neurofibromatosis-Noonan syndrome; Café-au-lait macules with pulmonary stenosis 2022-04-29 criteria provided, single submitter clinical testing
Baylor Genetics RCV003465204 SCV004198378 uncertain significance Juvenile myelomonocytic leukemia 2023-08-05 criteria provided, single submitter clinical testing

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