ClinVar Miner

Submissions for variant NM_001079802.2(FKTN):c.653A>T (p.Glu218Val)

gnomAD frequency: 0.00002  dbSNP: rs978338266
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002000925 SCV002267855 uncertain significance Walker-Warburg congenital muscular dystrophy 2021-08-24 criteria provided, single submitter clinical testing This sequence change replaces glutamic acid with valine at codon 218 of the FKTN protein (p.Glu218Val). The glutamic acid residue is highly conserved and there is a moderate physicochemical difference between glutamic acid and valine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals affected with FKTN-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Benign"; Align-GVGD: "Class C35"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV003303574 SCV004001244 uncertain significance Cardiovascular phenotype 2023-05-27 criteria provided, single submitter clinical testing The p.E218V variant (also known as c.653A>T), located in coding exon 5 of the FKTN gene, results from an A to T substitution at nucleotide position 653. The glutamic acid at codon 218 is replaced by valine, an amino acid with dissimilar properties. This amino acid position is conserved. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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