ClinVar Miner

Submissions for variant NM_001081.4(CUBN):c.3G>T (p.Met1Ile)

gnomAD frequency: 0.00068  dbSNP: rs11254385
Minimum review status: Collection method:
Minimum conflict level:
ClinVar version:
Total submissions: 4
Download table as spreadsheet
Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000413849 SCV000492048 likely pathogenic not provided 2016-11-22 criteria provided, single submitter clinical testing The c.3G>T variant in the CUBN gene has not been reported previously as a pathogenic variant, nor as a benign variant, to our knowledge. As this variant changes the translation initiator Methionine codon, the resultant protein is described as p.Met1?, using a question mark to signify that it is not known if the loss of Met1 means that all protein translation is completely prevented or if an abnormal protein is produced using an alternate Methionine. The c.3G>T variant was not observed with any significant frequency in approximately 6500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. The c.3G>T variant is a strong candidate for a pathogenic variant, however the possibility it may be a rare benign variant cannot be excluded.
Labcorp Genetics (formerly Invitae), Labcorp RCV001438020 SCV001640887 likely benign Imerslund-Grasbeck syndrome 2025-01-19 criteria provided, single submitter clinical testing
Mayo Clinic Laboratories, Mayo Clinic RCV000413849 SCV005410961 uncertain significance not provided 2023-10-04 criteria provided, single submitter clinical testing PVS1_supporting
Fulgent Genetics, Fulgent Genetics RCV005044630 SCV005674132 uncertain significance Imerslund-Grasbeck syndrome type 1; Proteinuria, chronic benign 2024-05-14 criteria provided, single submitter clinical testing

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.