ClinVar Miner

Submissions for variant NM_001083961.2(WDR62):c.1359C>T (p.Asn453=)

gnomAD frequency: 0.00138  dbSNP: rs148667984
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Genetic Services Laboratory, University of Chicago RCV000193171 SCV000249443 uncertain significance not specified 2015-03-11 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000404359 SCV000411630 likely benign Microcephaly 2, primary, autosomal recessive, with or without cortical malformations 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as likely benign is not then subjected to further curation. The score for this variant resulted in a classification of likely benign for this disease.
Eurofins Ntd Llc (ga) RCV000193171 SCV000862412 likely benign not specified 2018-08-01 criteria provided, single submitter clinical testing
Invitae RCV000962681 SCV001109777 benign not provided 2023-11-17 criteria provided, single submitter clinical testing
GeneDx RCV000962681 SCV001813421 likely benign not provided 2020-10-06 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003955176 SCV004779448 likely benign WDR62-related condition 2022-07-08 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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