ClinVar Miner

Submissions for variant NM_001110556.2(FLNA):c.2788G>A (p.Asp930Asn)

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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002995775 SCV003295672 uncertain significance Heterotopia, periventricular, X-linked dominant; Melnick-Needles syndrome; Oto-palato-digital syndrome, type II; Frontometaphyseal dysplasia 2022-11-28 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt FLNA protein function. This variant has not been reported in the literature in individuals affected with FLNA-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces aspartic acid, which is acidic and polar, with asparagine, which is neutral and polar, at codon 930 of the FLNA protein (p.Asp930Asn).
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV003111612 SCV003799643 uncertain significance not provided 2022-06-22 criteria provided, single submitter clinical testing The FLNA c.2788G>A; p.Asp930Asn variant (rs2067715380), to our knowledge, is not reported in the medical literature or gene specific databases. This variant is absent from the Genome Aggregation Database, indicating it is not a common polymorphism. The aspartate at codon 930 is highly conserved, but computational analyses are uncertain whether this variant is neutral or deleterious (REVEL: 0.7). Due to limited information, the clinical significance of this variant is uncertain at this time.
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV003324060 SCV004029231 uncertain significance not specified 2023-07-30 criteria provided, single submitter clinical testing
GeneDx RCV003111612 SCV005396441 uncertain significance not provided 2024-05-10 criteria provided, single submitter clinical testing In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; Has not been previously published as pathogenic or benign to our knowledge

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