ClinVar Miner

Submissions for variant NM_001110792.2(MECP2):c.474C>T (p.Gly158=)

gnomAD frequency: 0.00001  dbSNP: rs61748386
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
ClinGen Rett and Angelman-like Disorders Variant Curation Expert Panel RCV001800454 SCV002047346 likely benign Rett syndrome 2021-11-24 reviewed by expert panel curation The c.438C>T (p.Gly146=) variant in MECP2 (NM_004992.3) is absent from gnomAD (PM2_supporting). The p.Gly146= variant is observed in at least 1 unaffected individual (internal database - Invitae) (BS2_supporting). The p.Gly146= variant is found in a patient with an alternate molecular basis of disease (internal database - Invitae) (BP5). The Rett and Angelman-like Disorders Variant Curation Expert Panel classified this variant as Likely Benign based on BS2_supporting and BP5.
Eurofins Ntd Llc (ga) RCV000133110 SCV000202986 uncertain significance not provided 2013-12-23 criteria provided, single submitter clinical testing
Invitae RCV000556419 SCV000645666 benign Severe neonatal-onset encephalopathy with microcephaly 2023-10-22 criteria provided, single submitter clinical testing
GeneDx RCV000133110 SCV001773348 likely benign not provided 2021-04-03 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV000133110 SCV004165066 uncertain significance not provided 2022-11-01 criteria provided, single submitter clinical testing MECP2: PM2, BP5
PreventionGenetics, part of Exact Sciences RCV003892114 SCV004712726 likely benign MECP2-related condition 2023-05-11 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
RettBASE RCV000133110 SCV000188101 not provided not provided no assertion provided not provided

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