ClinVar Miner

Submissions for variant NM_001111.5(ADAR):c.3577G>A (p.Glu1193Lys)

dbSNP: rs1064796761
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000486456 SCV000573816 likely pathogenic not provided 2022-08-02 criteria provided, single submitter clinical testing Not observed at significant frequency in large population cohorts (gnomAD); In silico analysis supports that this missense variant does not alter protein structure/function; Observed with a pathogenic variant on the opposite allele (in trans) in a patient with clinical features consistent with ADAR-related Aicardi-Goutieres syndrome in published literature (Samanta et al., 2019); This variant is associated with the following publications: (PMID: 30692772)
Invitae RCV000805404 SCV000945358 uncertain significance Symmetrical dyschromatosis of extremities; Aicardi-Goutieres syndrome 6 2022-09-09 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt ADAR protein function. ClinVar contains an entry for this variant (Variation ID: 424040). This missense change has been observed in individual(s) with ADAR-related conditions (PMID: 30692772). This variant is not present in population databases (gnomAD no frequency). This sequence change replaces glutamic acid, which is acidic and polar, with lysine, which is basic and polar, at codon 1193 of the ADAR protein (p.Glu1193Lys).

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