ClinVar Miner

Submissions for variant NM_001111125.3(IQSEC2):c.2508G>A (p.Ala836=)

gnomAD frequency: 0.00060  dbSNP: rs2274308
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000445018 SCV000528488 benign not specified 2018-02-02 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV001081247 SCV000649574 benign Intellectual disability, X-linked 1 2024-01-18 criteria provided, single submitter clinical testing
Athena Diagnostics RCV000712006 SCV000842419 benign not provided 2018-01-23 criteria provided, single submitter clinical testing
Ambry Genetics RCV002318466 SCV000849614 benign Inborn genetic diseases 2017-04-27 criteria provided, single submitter clinical testing This alteration is classified as benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Breakthrough Genomics, Breakthrough Genomics RCV000712006 SCV005279227 benign not provided criteria provided, single submitter not provided
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV000712006 SCV001932534 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000712006 SCV001972447 likely benign not provided no assertion criteria provided clinical testing

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