Total submissions: 3
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Invitae | RCV001063266 | SCV001228104 | likely benign | Intellectual disability, X-linked 1 | 2024-01-17 | criteria provided, single submitter | clinical testing | |
Gene |
RCV001664652 | SCV001872881 | uncertain significance | not provided | 2021-07-08 | criteria provided, single submitter | clinical testing | Has not been previously published as pathogenic or benign to our knowledge; In silico analysis supports that this missense variant does not alter protein structure/function; This variant is associated with the following publications: (PMID: 27535533) |
Women's Health and Genetics/Laboratory Corporation of America, |
RCV003226431 | SCV003922779 | uncertain significance | not specified | 2023-03-13 | criteria provided, single submitter | clinical testing | Variant summary: IQSEC2 c.4050C>A (p.His1350Gln) results in a non-conservative amino acid change in the encoded protein sequence. Three of five in-silico tools predict a benign effect of the variant on protein function. The variant allele was found at a frequency of 1.2e-05 in 83550 control chromosomes (i.e, 1 heterozygous female carrier; gnomAD v2.1.1 Exomes cohort). The available data on variant occurrences in the general population are insufficient to allow any conclusion about variant significance. To our knowledge, no occurrence of c.4050C>A in individuals affected with Intellectual Disability, X-Linked 1 and no experimental evidence demonstrating its impact on protein function have been reported. Two clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar after 2014, and all laboratories classified the variant as uncertain significance. Based on the evidence outlined above, the variant was classified as uncertain significance. |