ClinVar Miner

Submissions for variant NM_001127222.2(CACNA1A):c.2638C>T (p.Arg880Trp)

gnomAD frequency: 0.00001  dbSNP: rs1408152396
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001232421 SCV001404979 uncertain significance Episodic ataxia type 2; Developmental and epileptic encephalopathy, 42 2022-08-16 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt CACNA1A protein function. ClinVar contains an entry for this variant (Variation ID: 959130). This variant has not been reported in the literature in individuals affected with CACNA1A-related conditions. This variant is present in population databases (no rsID available, gnomAD 0.001%). This sequence change replaces arginine, which is basic and polar, with tryptophan, which is neutral and slightly polar, at codon 881 of the CACNA1A protein (p.Arg881Trp).
Ambry Genetics RCV004033165 SCV004916232 uncertain significance Inborn genetic diseases 2023-12-28 criteria provided, single submitter clinical testing The c.2641C>T (p.R881W) alteration is located in exon 19 (coding exon 19) of the CACNA1A gene. This alteration results from a C to T substitution at nucleotide position 2641, causing the arginine (R) at amino acid position 881 to be replaced by a tryptophan (W). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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