ClinVar Miner

Submissions for variant NM_001127222.2(CACNA1A):c.2754C>T (p.Gly918=)

gnomAD frequency: 0.00002  dbSNP: rs371757002
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000432692 SCV000529769 uncertain significance not provided 2016-07-13 criteria provided, single submitter clinical testing A variant of uncertain significance has been identified in the CACNA1A gene. The c.2757 C>T variant has not been published as a pathogenic variant, nor has it been reported as a benign variant to our knowledge. The c.2757 C>T variant was not observed with any significant frequency in approximately 5,600 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project. This substitution occurs at a position that is not conserved. Several in-silico splice prediction models predict that c.2757 C>T creates a cryptic donor site which may supplant the natural donor site in exon 19 and lead to abnormal gene splicing. However, in the absence of RNA/functional studies, the actual effect of this sequence change is unknown. Therefore, based on the currently available information, it is unclear whether this variant is a pathogenic variant or a rare benign variant.
Invitae RCV000691135 SCV000818878 benign Episodic ataxia type 2; Developmental and epileptic encephalopathy, 42 2024-01-14 criteria provided, single submitter clinical testing

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