ClinVar Miner

Submissions for variant NM_001127222.2(CACNA1A):c.3057G>A (p.Arg1019=)

gnomAD frequency: 0.14118  dbSNP: rs16025
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Total submissions: 13
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000116523 SCV000202321 benign not specified 2014-03-18 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV000116523 SCV000306695 benign not specified criteria provided, single submitter clinical testing
GeneDx RCV000116523 SCV000518852 benign not specified 2016-01-08 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Athena Diagnostics RCV000116523 SCV000841259 benign not specified 2021-05-03 criteria provided, single submitter clinical testing
Ambry Genetics RCV002312051 SCV000845853 benign Inborn genetic diseases 2016-03-11 criteria provided, single submitter clinical testing This alteration is classified as benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Labcorp Genetics (formerly Invitae), Labcorp RCV001515627 SCV001723739 benign Episodic ataxia type 2; Developmental and epileptic encephalopathy, 42 2025-02-04 criteria provided, single submitter clinical testing
Unidad de Genómica Garrahan, Hospital de Pediatría Garrahan RCV000116523 SCV005087884 benign not specified 2024-07-15 criteria provided, single submitter clinical testing This variant is classified as Benign based on local population frequency. This variant was detected in 30% of patients studied in a panel designed for Epileptic and Developmental Encephalopathy and Progressive Myoclonus Epilepsy. Number of patients: 28. Only high quality variants are reported.
Breakthrough Genomics, Breakthrough Genomics RCV004716955 SCV005315287 benign not provided criteria provided, single submitter not provided
Genetic Services Laboratory, University of Chicago RCV000116523 SCV000150472 likely benign not specified no assertion criteria provided clinical testing Likely benign based on allele frequency in 1000 Genomes Project or ESP global frequency and its presence in a patient with a rare or unrelated disease phenotype. NOT Sanger confirmed.
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen RCV000116523 SCV001744040 benign not specified no assertion criteria provided clinical testing
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV000116523 SCV001927163 benign not specified no assertion criteria provided clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ RCV000116523 SCV001958697 benign not specified no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000116523 SCV001969241 benign not specified no assertion criteria provided clinical testing

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