Total submissions: 1
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Gene |
RCV000413385 | SCV000491446 | likely pathogenic | not provided | 2016-02-08 | criteria provided, single submitter | clinical testing | The W1462X variant has not been published as a pathogenic variant, nor has it been reported as a benign variant to our knowledge. It was not observed in approximately 6,000 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. The W1462X nonsense variant in the CACNA1A gene is predicted to cause loss of normal protein function either through protein truncation or nonsense-mediated mRNA decay. Additionally, multiple downstream nonsense variants have been reported in Human Gene Mutation Database in association with CACNA1A-related disorders (Stenson et al., 2014), supporting the functional importance of this region of the protein. Therefore, this variant is likely pathogenic; however, the possibility that it is benign cannot be excluded. |