ClinVar Miner

Submissions for variant NM_001127222.2(CACNA1A):c.6340A>T (p.Thr2114Ser)

dbSNP: rs2054722290
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001235537 SCV001408228 uncertain significance Episodic ataxia type 2; Developmental and epileptic encephalopathy, 42 2019-07-31 criteria provided, single submitter clinical testing The frequency data for this variant in the population databases is considered unreliable, as metrics indicate insufficient coverage at this position in the ExAC database. This sequence change replaces threonine with serine at codon 2115 of the CACNA1A protein (p.Thr2115Ser). The threonine residue is moderately conserved and there is a small physicochemical difference between threonine and serine. This variant has not been reported in the literature in individuals with CACNA1A-related conditions. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Possibly Damaging"; Align-GVGD: "Class C0").

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