ClinVar Miner

Submissions for variant NM_001127255.2(NLRP7):c.2177C>T (p.Ala726Val)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Victorian Clinical Genetics Services, Murdoch Childrens Research Institute RCV004788380 SCV005400214 likely pathogenic Hydatidiform mole, recurrent, 1 2023-12-21 criteria provided, single submitter clinical testing Based on the classification scheme VCGS_Germline_v1.3.4, this variant is classified as Likely Pathogenic. Following criteria are met: 0102 - Loss of function is the likely mechanism of disease in this gene and is associated with hydatidiform mole, recurrent 1 (MIM#231090). (I) 0106 - This gene is associated with autosomal recessive disease. (I) 0113 - This gene is postulated to be associated with a maternal multi-locus imprinting defect (PMID: 35842788). (I) 0200 - Variant is predicted to result in a missense amino acid change from alanine to valine. (I) 0251 - This variant is heterozygous. (I) 0301 - Variant is absent from gnomAD (both v2 and v3). (SP) 0503 - Missense variant consistently predicted to be tolerated by multiple in silico tools or not conserved in placental mammals with a minor amino acid change. However, this residue is well-conserved in primates and in silico tools are unreliable due to lineage-specific evolution (PMID: 19682372). (I) 0600 - Variant is located in the leucine-rich region (PMID: 19246479). (I) 0705 - No comparable missense variants have previous evidence for pathogenicity. (I) 0807 - This variant has no previous evidence of pathogenicity. (I) 0905 - No published segregation evidence has been identified for this variant. (I) 1007 - No published functional evidence has been identified for this variant. (I) 1101 - Very strong and specific phenotype match for this individual. (SP) 1201 - Heterozygous variant detected in trans with a second pathogenic heterozygous variant (c.2161C>T; p.(Arg721Trp)) in a recessive disease. (SP) 1208 - Inheritance information for this variant is not currently available in this individual. (I) Legend: (SP) - Supporting pathogenic, (I) - Information, (SB) - Supporting benign

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