ClinVar Miner

Submissions for variant NM_001130438.3(SPTAN1):c.1689G>T (p.Met563Ile)

gnomAD frequency: 0.00009  dbSNP: rs373973880
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000713504 SCV000243074 likely benign not provided 2020-02-05 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000699799 SCV000828526 benign Early infantile epileptic encephalopathy with suppression bursts 2024-01-22 criteria provided, single submitter clinical testing
Athena Diagnostics RCV000713504 SCV000844125 uncertain significance not provided 2018-02-09 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV000713504 SCV001248841 likely benign not provided 2024-07-01 criteria provided, single submitter clinical testing SPTAN1: BP4
Genome-Nilou Lab RCV001808480 SCV002056536 likely benign Developmental and epileptic encephalopathy, 5 2021-07-15 criteria provided, single submitter clinical testing
Ambry Genetics RCV002408850 SCV002715350 likely benign Inborn genetic diseases 2017-08-28 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

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